The La Liga club are said to have bid £45m and Andre Gomes as well as Yerry Mina for the 25 year old.
The financial penalty consists of two weeks' wages for the 26-year-old goalkeeper, who is thought to be on a £100,000-per-week deal.
The Mail published a story earlier this week with the headline, "I want Paul Pogba out of Manchester United" - a misleadingly fabricated quote attributed to Raiola.
That was a tempting swap deal but Manchester United made their intentions clear enough to reject the offer.
There is plenty of Manchester United and Arsenal gossip doing the rounds in the papers with the English giants linked with a whole host of star names ahead of deadline day.
United executive vice-chairman Ed Woodward is naturally understood to be unwilling to sell club-record signing Pogba - a stance backed by former defender Rio Ferdinand, just as a move for Alderweireld would be.
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If Pogba, Sanchez and Lukaku click together, United have the potential to be an exciting team going forward with Fred offering help to Nemanja Matic in the centre of midfield.
Reports in both Spain and England suggest that the Gunners are keen on making a move for Ousmane Dembele with a rumoured €100 million deal in the works, a player who Emery is said to love.
United need trophies, and both Pogba and Jose can play an important role in helping the club achieve its targets.
The World Cup winning midfielder returned to United in 2016 following a spell in Italy with Juventus.
Although Pogba wanted to leave, he also did not intend to ever go to war with his club over it either.
Since losing our very first home match of the Premier League, against Everton in 1992/93, United have been beaten just once in an opening Old Trafford fixture.